I wonder if the second battery pack replaces the 3v transformer shown in the linked manual. Reassemble the unit, pop in some batteries, follow the guide and see what happens. Keep your face away from the burner assembly when attempting to light. Good luck, I normally wouldn't tell you to do this but it is outside and you are "The Dude". :biggrin2:
https://www.napoleonproducts.com/do.../service-manuals/Electronic-Ignition-2012.pdf
https://www.napoleonproducts.com/do.../service-manuals/Electronic-Ignition-2012.pdf