[Stephen Hill]

Hi Saltri,
Tile the whole floor, grout and seal. Toilet goes in last. jToilet sits on top of the tile.
Mike Hawkins

I agree, toilet sits on top of the tile. As far as caulking around the bottom of the toilet, I have heard both ways to not do it and to do it. I steer towards not caulking it because if there is a leak down the road you want the water to run onto the floor so you know there is a leak rather than just traping it all inside and finding out too late. Sometimes I run a bead of caulk around the back half of the toilet just so you get any shift.